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serine/arginine repetitive matrix protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816458, updated on 18-Sep-2024

Summary

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Official Full Name
serine/arginine repetitive matrix protein
Primary source
TAIR:AT2G19390
Locus tag
AT2G19390
See related
Araport:AT2G19390
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F27F23.19; F27F23_19
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Genomic context

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Location:
chromosome: 2
Exon count:
16
Sequence:
Chromosome: 2; NC_003071.7 (8389610..8397939, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-splicing ligase, putative (DUF239) Neighboring gene Myb/SANT-like DNA-binding domain protein Neighboring gene RNA recognition motif (RRM)-containing protein Neighboring gene zinc ion binding protein Neighboring gene microRNA ath-MIR5632 precursor Neighboring gene AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein Neighboring gene U-box domain-containing protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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  • mature miRNA accession:MIMAT0022392
  • mature miRNA accession:MIMAT0032127
NM_001335633.1
NM_127497.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine/arginine repetitive matrix protein
NP_565452.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G29790.1); Has 203 Blast hits to 188 proteins in 60 species: Archae - 0; Bacteria - 11; Metazoa - 24; Fungi - 34; Plants - 93; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    8389610..8397939 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127497.2 → NP_565452.1  serine/arginine repetitive matrix protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565452.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYY7, O64572, Q93YU9

  2. NM_001335633.1 → NP_001324482.1  serine/arginine repetitive matrix protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYY7, O64572, Q93YU9
Nucleotide Protein
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