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transmembrane/coiled-coil protein (DUF726) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816322, updated on 18-Sep-2024

Summary

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Official Full Name
transmembrane/coiled-coil protein (DUF726)
Primary source
TAIR:AT2G18100
Locus tag
AT2G18100
See related
Araport:AT2G18100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T27K22.3; T27K22_3
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Genomic context

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Location:
chromosome: 2
Exon count:
15
Sequence:
Chromosome: 2; NC_003071.7 (7867828..7871801)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein Neighboring gene Translation elongation factor EF1B/ribosomal protein S6 family protein Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_001335582.1
NM_001335583.1
NM_001335584.1
NM_127366.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
transmembrane/coiled-coil protein (DUF726)
NP_179401.2
  • Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT4G36210.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    7867828..7871801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_127366.4 → NP_179401.2  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179401.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WZ81, F4IPL5
    Conserved Domains (1) summary
    cl21494
    Location:297 → 646
    Abhydrolase; alpha/beta hydrolases

  2. NM_001335582.1 → NP_001323554.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W1G7, A0A1P8AXD2, A0A5S9WZ81

  3. NM_001335583.1 → NP_001323553.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8AXD9

  4. NM_001335584.1 → NP_001323552.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W1G7, A0A1P8AXI8, A0A5S9WZ81
Nucleotide Protein
Heading Accession and Version

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