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MBR1 RING/U-box superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 816045, updated on 18-Sep-2024

Summary

Official Symbol
MBR1
Official Full Name
RING/U-box superfamily protein
Primary source
TAIR:AT2G15530
Locus tag
AT2G15530
See related
Araport:AT2G15530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MED25 BINDING RING-H2 PROTEIN 1
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Genomic context

See MBR1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Sequence:
Chromosome: 2; NC_003071.7 (6772714..6777985)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene low-molecular-weight cysteine-rich 10

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001202601.1
NM_001335454.1
NM_001335455.1
NM_127113.4
NM_201741.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
RING/U-box superfamily protein
NP_001118324.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_001189530.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1).
NP_179155.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 9020 Blast hits to 8257 proteins in 301 species: Archae - 0; Bacteria - 55; Metazoa - 2556; Fungi - 687; Plants - 3907; Viruses - 28; Other Eukaryotes - 1787 (source: NCBI BLink).
NP_973470.1
  • RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G34040.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    6772714..6777985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001124852.5NP_001118324.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001118324.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQF9
    UniProtKB/TrEMBL
    A0A5S9WY85
    Conserved Domains (2) summary
    pfam12678
    Location:656697
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:656697
    zf-RING_2; Ring finger domain
  2. NM_001335453.1NP_001325050.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQF9
    UniProtKB/TrEMBL
    A0A5S9WY85
  3. NM_201741.2NP_973470.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973470.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQF9
    UniProtKB/TrEMBL
    A0A5S9WY85
    Conserved Domains (2) summary
    pfam12678
    Location:656697
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:656697
    zf-RING_2; Ring finger domain
  4. NM_127113.4NP_179155.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_179155.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQF9
    UniProtKB/TrEMBL
    A0A5S9WY85
    Conserved Domains (2) summary
    pfam12678
    Location:656697
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:656697
    zf-RING_2; Ring finger domain
  5. NM_001335454.1NP_001325052.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VZ64, A0A1P8B1Z6, A0A5S9WY85
  6. NM_001202601.1NP_001189530.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001189530.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9WY85, F4IIG9
    Conserved Domains (2) summary
    pfam12678
    Location:656695
    zf-rbx1; RING-H2 zinc finger
    pfam13639
    Location:656697
    zf-RING_2; Ring finger domain
  7. NM_001335455.1NP_001325051.1  RING/U-box superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZQF9
    UniProtKB/TrEMBL
    A0A5S9WY85