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Basic-leucine zipper (bZIP) transcription factor family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815769, updated on 18-Sep-2024

Summary

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Official Full Name
Basic-leucine zipper (bZIP) transcription factor family protein
Primary source
TAIR:AT2G12900
Locus tag
AT2G12900
See related
Araport:AT2G12900
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
basic leucine-zipper 33; bZIP33; T18E17.2
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (5293897..5295480)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Zinc knuckle (CCHC-type) family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of functions of VIP1 and its close homologs in osmosensory responses of Arabidopsis thaliana. Tsugama D, et al. PLoS One, 2014. PMID 25093810, Free PMC Article
  2. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833
  3. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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NM_126901.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Basic-leucine zipper (bZIP) transcription factor family protein
NP_565355.1
  • Basic-leucine zipper (bZIP) transcription factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus, chloroplast; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G12940.1); Has 1373 Blast hits to 1364 proteins in 175 species: Archae - 2; Bacteria - 73; Metazoa - 486; Fungi - 39; Plants - 637; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    5293897..5295480
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126901.1 → NP_565355.1  Basic-leucine zipper (bZIP) transcription factor family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565355.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654ESJ6, Q9SKG1
    Conserved Domains (2) summary
    cd14703
    Location:119 → 170
    bZIP_plant_RF2; Basic leucine zipper (bZIP) domain of Plant RF2-like transcription factors: a DNA-binding and dimerization domain
    pfam10211
    Location:152 → 208
    Ax_dynein_light; Axonemal dynein light chain
Nucleotide Protein
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