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Ycf1 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815412, updated on 18-Sep-2024

Summary

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Official Full Name
Ycf1 protein
Primary source
TAIR:AT2G07739
Locus tag
AT2G07739
See related
Araport:AT2G07739
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5E7.2; T5E7_2
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (3495511..3496398, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene tRNA-Pro Neighboring gene miscRNA Neighboring gene tRNA-Cys Neighboring gene tRNA-Asn Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene tRNA-Tyr

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_126767.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ycf1 protein
NP_178809.1
  • Ycf1 protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Ycf1 (InterPro:IPR008896); BEST Arabidopsis thaliana protein match is: Ycf1 protein (TAIR:ATMG00370.1); Has 1145 Blast hits to 1145 proteins in 726 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    3495511..3496398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126767.2 → NP_178809.1  Ycf1 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178809.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P93296, Q27GL5, Q8S8J2
    UniProtKB/TrEMBL
    A0A5S9YIA0, A0A654GF54
    Conserved Domains (1) summary
    pfam05758
    Location:22 → 176
    Ycf1; Ycf1
Nucleotide Protein
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