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cytochrome b [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815400, updated on 18-Sep-2024

Summary

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Official Full Name
cytochrome b
Primary source
TAIR:AT2G07727
Locus tag
AT2G07727
See related
Araport:AT2G07727
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T5E7.15; T5E7_15
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_003071.7 (3449534..3452776)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ribosomal L5P family protein Neighboring gene miscRNA Neighboring gene tRNA-Ser Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis PPR40 connects abiotic stress responses to mitochondrial electron transport. Zsigmond L, et al. Plant Physiol, 2008 Apr. PMID 18305213, Free PMC Article
  2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_126762.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cytochrome b
NP_178804.1
  • Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal; FUNCTIONS IN: electron carrier activity, oxidoreductase activity; INVOLVED IN: respiratory electron transport chain; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: Cytochrome b/b6, C-terminal (InterPro:IPR005798), Cytochrome b/b6 (InterPro:IPR016175), Di-haem cytochrome, transmembrane (InterPro:IPR016174), Cytochrome b/b6, N-terminal (InterPro:IPR005797); BEST Arabidopsis thaliana protein match is: apocytochrome b (TAIR:ATMG00220.1); Has 180948 Blast hits to 180662 proteins in 32826 species: Archae - 150; Bacteria - 2756; Metazoa - 167905; Fungi - 1359; Plants - 1860; Viruses - 0; Other Eukaryotes - 6918 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    3449534..3452776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126762.3 → NP_178804.1  cytochrome b [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178804.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9YIQ0, A7KNF9
    Conserved Domains (1) summary
    MTH00156
    Location:19 → 373
    CYTB; cytochrome b; Provisional
Nucleotide Protein
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Research Materials