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phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 815062, updated on 18-Sep-2024

Summary

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Official Full Name
phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein
Primary source
TAIR:AT2G05140
Locus tag
AT2G05140
See related
Araport:AT2G05140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F5G3.4; F5G3_4
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Genomic context

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Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (1853935..1854903)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphoribosylaminoimidazole carboxylase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in 'de novo' IMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein
NP_178587.1
  • phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein; FUNCTIONS IN: phosphoribosylaminoimidazole carboxylase activity; INVOLVED IN: 'de novo' IMP biosynthetic process; LOCATED IN: phosphoribosylaminoimidazole carboxylase complex; CONTAINS InterPro DOMAIN/s: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase (InterPro:IPR000031); BEST Arabidopsis thaliana protein match is: phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative (TAIR:AT2G37690.1); Has 7010 Blast hits to 6993 proteins in 2461 species: Archae - 217; Bacteria - 4355; Metazoa - 104; Fungi - 163; Plants - 54; Viruses - 0; Other Eukaryotes - 2117 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    1853935..1854903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126542.1 → NP_178587.1  phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178587.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9SJ42
    Conserved Domains (1) summary
    pfam00731
    Location:1 → 142
    AIRC; AIR carboxylase
Nucleotide Protein
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