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LpxB transferases, transferring glycosyl groups [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814998, updated on 18-Sep-2024

Summary

Official Symbol
LpxB
Official Full Name
transferases, transferring glycosyl groups
Primary source
TAIR:AT2G04560
Locus tag
AT2G04560
See related
Araport:AT2G04560
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtLpxB; lipid X B; T1O3.3; T1O3_3
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Genomic context

See LpxB in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (1590182..1592703, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene indole-3-butyric acid response 5 Neighboring gene GDSL-like Lipase/Acylhydrolase superfamily protein Neighboring gene pseudo

General gene information

NM_126487.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast  
located_in mitochondrion PubMed 
located_in mitochondrion PubMed 

General protein information

Preferred Names
transferases, transferring glycosyl groups
NP_178535.3
  • transferases, transferring glycosyl groups; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 19 (InterPro:IPR003835); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    1590182..1592703 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126487.4 → NP_178535.3  transferases, transferring glycosyl groups [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178535.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4IF99, Q500V1, Q9SJB5
    UniProtKB/TrEMBL
    A0A654ET89, A0A7G2E905, W8Q740
    Conserved Domains (1) summary
    cl10013
    Location:40 → 424
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
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