U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CPZ Metallo-hydrolase/oxidoreductase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814995, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
CPZ
Official Full Name
Metallo-hydrolase/oxidoreductase superfamily protein
Primary source
TAIR:AT2G04530
Locus tag
AT2G04530
See related
Araport:AT2G04530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T1O3.6; T1O3_6; TRNASE Z 2; TRZ2
Summary
Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CPZ in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Sequence:
Chromosome: 2; NC_003071.7 (1576694..1578962)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene Beta-ketoacyl synthase Neighboring gene miscRNA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Assigning a function to a conserved group of proteins: the tRNA 3'-processing enzymes. Schiffer S, et al. EMBO J, 2002 Jun 3. PMID 12032089, Free PMC Article
  2. Arabidopsis encodes four tRNase Z enzymes. Canino G, et al. Plant Physiol, 2009 Jul. PMID 19411372, Free PMC Article
  3. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_126484.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables 3'-tRNA processing endoribonuclease activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within tRNA 3'-end processing IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within tRNA processing TAS
Traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
Metallo-hydrolase/oxidoreductase superfamily protein
NP_178532.2
  • CPZ; CONTAINS InterPro DOMAIN/s: Beta-lactamase-like (InterPro:IPR001279); BEST Arabidopsis thaliana protein match is: tRNAse Z1 (TAIR:AT1G74700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    1576694..1578962
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126484.5 → NP_178532.2  Metallo-hydrolase/oxidoreductase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178532.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L633, Q8LGU8, Q9SJB8
    UniProtKB/TrEMBL
    A0A178VZE6, A0A5S9WX57, A0A654EWV5
    Conserved Domains (1) summary
    cd16272
    Location:89 → 278
    RNaseZ_MBL-fold; Ribonuclease Z; MBL-fold metallo-hydrolase domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L633.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.