U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SNARE associated Golgi protein family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814768, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
SNARE associated Golgi protein family
Primary source
TAIR:AT2G02370
Locus tag
AT2G02370
See related
Araport:AT2G02370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T16F16.16; T16F16_16
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 2
Exon count:
5
Sequence:
Chromosome: 2; NC_003071.7 (621058..623526)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene SKP1 interacting partner 3 Neighboring gene phloem protein 2-B10 Neighboring gene glutathione S-transferase (class zeta) 2 Neighboring gene glutathione S-transferase zeta 1 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help
NM_001084401.1
NM_001335106.1
NM_126294.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
SNARE associated Golgi protein family
NP_001077870.1
  • SNARE associated Golgi protein family; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink).
NP_565283.1
  • SNARE associated Golgi protein family; CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G12450.1); Has 2420 Blast hits to 2420 proteins in 703 species: Archae - 6; Bacteria - 1288; Metazoa - 120; Fungi - 130; Plants - 226; Viruses - 0; Other Eukaryotes - 650 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    621058..623526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126294.4 → NP_565283.1  SNARE associated Golgi protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565283.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W0A6, A0A5S9WWW3, Q9ASX7, Q9ZVQ5
    Conserved Domains (2) summary
    COG0398
    Location:63 → 286
    TVP38; Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Function unknown]
    COG0586
    Location:88 → 283
    DedA; Uncharacterized membrane protein DedA, SNARE-associated domain [Function unknown]

  2. NM_001335106.1 → NP_001324972.1  SNARE associated Golgi protein family [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W0A6, A0A5S9WWW3, Q9ASX7, Q9ZVQ5

  3. NM_001084401.1 → NP_001077870.1  SNARE associated Golgi protein family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001077870.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178W0A6, A0A5S9WWW3, Q9ASX7, Q9ZVQ5
    Conserved Domains (2) summary
    COG0398
    Location:63 → 286
    TVP38; Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain [Function unknown]
    COG0586
    Location:88 → 283
    DedA; Uncharacterized membrane protein DedA, SNARE-associated domain [Function unknown]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools