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PP2-B8 phloem protein 2-B8 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814765, updated on 18-Sep-2024

Summary

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Official Symbol
PP2-B8
Official Full Name
phloem protein 2-B8
Primary source
TAIR:AT2G02340
Locus tag
AT2G02340
See related
Araport:AT2G02340
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AtPP2-B8; phloem protein 2-B8; T16F16.13; T16F16_13
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Genomic context

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See PP2-B8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (616088..617322, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene phloem protein 2-B7 Neighboring gene miscRNA Neighboring gene SKP1 interacting partner 3 Neighboring gene phloem protein 2-B10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diversity of the superfamily of phloem lectins (phloem protein 2) in angiosperms. Dinant S, et al. Plant Physiol, 2003 Jan. PMID 12529520, Free PMC Article
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbohydrate binding ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
phloem protein 2-B8
NP_178339.1
  • phloem protein 2-B8 (PP2-B8); CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B7 (TAIR:AT2G02320.1); Has 560 Blast hits to 546 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 560; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    616088..617322 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126291.2 → NP_178339.1  phloem protein 2-B8 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_178339.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9ZVQ8
    UniProtKB/TrEMBL
    A0A178VU07, A0A7G2E4W9
    Conserved Domains (2) summary
    pfam00646
    Location:36 → 80
    F-box; F-box domain
    pfam14299
    Location:128 → 301
    PP2; Phloem protein 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZVQ8.1

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