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Ankyrin repeat family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814697, updated on 18-Sep-2024

Summary

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Official Full Name
Ankyrin repeat family protein
Primary source
TAIR:AT2G01680
Locus tag
AT2G01680
See related
Araport:AT2G01680
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T8O11.15; T8O11_15
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (306251..309267)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene nudix hydrolase homolog 17 Neighboring gene ARM repeat superfamily protein Neighboring gene pseudo Neighboring gene Chaperone DnaJ-domain superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_126229.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ankyrin repeat family protein
NP_565274.1
  • Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    306251..309267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126229.4 → NP_565274.1  Ankyrin repeat family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565274.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LFC8, Q9ZU96
    UniProtKB/TrEMBL
    A0A178VS18, A0A5S9WWN3, A0A654ESN7
    Conserved Domains (3) summary
    sd00045
    Location:161 → 193
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:166 → 250
    Ank_2; Ankyrin repeats (3 copies)
    pfam13962
    Location:345 → 455
    PGG; Domain of unknown function
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZU96.1

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