U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PDLP6 plasmodesmata-located protein 6 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 814695, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
PDLP6
Official Full Name
plasmodesmata-located protein 6
Primary source
TAIR:AT2G01660
Locus tag
AT2G01660
See related
Araport:AT2G01660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
plasmodesmata-located protein 6; T8O11.17; T8O11_17
Summary
Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PDLP6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_003071.7 (290573..292688, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis protein Neighboring gene plant UBX domain-containing protein 2 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene nudix hydrolase homolog 17

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Specific targeting of a plasmodesmal protein affecting cell-to-cell communication. Thomas CL, et al. PLoS Biol, 2008 Jan. PMID 18215111, Free PMC Article
  2. A membrane protein/signaling protein interaction network for Arabidopsis version AMPv2. Lalonde S, et al. Front Physiol, 2010. PMID 21423366, Free PMC Article
  3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
  4. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  5. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

NM_001335072.1
NM_126227.3
NM_201665.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasmodesma HDA PubMed 
located_in plasmodesma IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
plasmodesmata-located protein 6
NP_565272.1
  • plasmodesmata-located protein 6 (PDLP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 7 (TAIR:AT5G37660.2); Has 1458 Blast hits to 1310 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1458; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
NP_973394.1
  • plasmodesmata-located protein 6 (PDLP6); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF26 (InterPro:IPR002902); BEST Arabidopsis thaliana protein match is: plasmodesmata-located protein 7 (TAIR:AT5G37660.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    290573..292688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_126227.3 → NP_565272.1  plasmodesmata-located protein 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_565272.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q0WTE1, Q3EC88, Q8LDG0, Q8W466, Q9ZU94
    UniProtKB/TrEMBL
    A0A178VZC0, A0A5S9WWC9, A0A654ER47
    Conserved Domains (1) summary
    pfam01657
    Location:31 → 128
    Stress-antifung; Salt stress response/antifungal

  2. NM_001335072.1 → NP_001324707.1  plasmodesmata-located protein 6 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VYC5, A0A178VZC0, A0A1P8B0Y6, A0A384K8H6
    Conserved Domains (1) summary
    pfam01657
    Location:31 → 128
    Stress-antifung; Salt stress response/antifungal

  3. NM_201665.2 → NP_973394.1  plasmodesmata-located protein 6 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_973394.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178VZC0
    Conserved Domains (1) summary
    pfam01657
    Location:33 → 128
    Stress-antifung; Salt stress response/antifungal
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9ZU94.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools