U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC8086274 protein ENHANCED DISEASE RESISTANCE 2 [ Sorghum bicolor (sorghum) ]

Gene ID: 8086274, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
LOC8086274
Gene description
protein ENHANCED DISEASE RESISTANCE 2
Locus tag
SORBI_3001G281100
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC8086274 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (55064164..55072602, complement)

Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene probable glutathione S-transferase GSTU6 Neighboring gene J domain-containing protein DDB_G0295729-like Neighboring gene uncharacterized LOC8086273 Neighboring gene probable methyltransferase PMT21 Neighboring gene uncharacterized LOC8086277

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein ENHANCED DISEASE RESISTANCE 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    55064164..55072602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021448267.1 → XP_021303942.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X2

    UniProtKB/TrEMBL
    A0A1B6QLJ4
    Conserved Domains (1) summary
    PLN00188
    Location:10 → 727
    PLN00188; enhanced disease resistance protein (EDR2); Provisional

  2. XM_002467368.2 → XP_002467413.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X1

    See identical proteins and their annotated locations for XP_002467413.1

    UniProtKB/TrEMBL
    A0A921S298, C5WQL1
    Conserved Domains (1) summary
    PLN00188
    Location:10 → 731
    PLN00188; enhanced disease resistance protein (EDR2); Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials