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LOC8084439 uncharacterized LOC8084439 [ Sorghum bicolor (sorghum) ]

Gene ID: 8084439, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8084439
Gene description
uncharacterized LOC8084439
Locus tag
SORBI_3009G207600
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8084439 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 9 NC_012878.2 (55511983..55514986, complement)

Chromosome 9 - NC_012878.2Genomic Context describing neighboring genes Neighboring gene protein STICHEL-like 4 Neighboring gene F-box protein At1g30790-like Neighboring gene ALA-interacting subunit 1 Neighboring gene uncharacterized LOC110430331

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012878.2 Chromosome 9 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC8084439

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012878.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    55511983..55514986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002441382.2 → XP_002441427.1  uncharacterized protein LOC8084439

    See identical proteins and their annotated locations for XP_002441427.1

    UniProtKB/TrEMBL
    A0A921QB32, C5Z1H0
    Conserved Domains (3) summary
    pfam00226
    Location:75 → 137
    DnaJ; DnaJ domain
    pfam13237
    Location:161 → 210
    Fer4_10; 4Fe-4S dicluster domain
    pfam13370
    Location:162 → 214
    Fer4_13; 4Fe-4S single cluster domain of Ferredoxin I
Nucleotide Protein
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Molecular Biology Databases
Research Materials