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COX1 cytochrome c oxidase subunit I [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 807872, updated on 8-Mar-2024

Summary

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Gene symbol
COX1
Gene description
cytochrome c oxidase subunit I
Locus tag
KEF42_p11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
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Genomic context

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See COX1 in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) MT (non-nuclear) NC_001644.1 (5322..6863)

Chromosome MT - NC_001644.1Genomic Context describing neighboring genes Neighboring gene tRNA-Cys Neighboring gene tRNA-Tyr Neighboring gene tRNA-Ser Neighboring gene tRNA-Asp Neighboring gene cytochrome c oxidase subunit II

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001644.1 Chromosome MT Reference NHGRI_mPanPan1-v2.0_pri non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comparison of the small ribosomal RNA genes from the mitochondrial DNA of the great apes and humans: sequence, structure, evolution, and phylogenetic implications. Hixson JE, et al. Mol Biol Evol, 1986 Jan. PMID 3444394
  2. Comparisons of ape and human sequences that regulate mitochondrial DNA transcription and D-loop DNA synthesis. Foran DR, et al. Nucleic Acids Res, 1988 Jul 11. PMID 3399380, Free PMC Article
  3. Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs. Horai S, et al. Proc Natl Acad Sci U S A, 1995 Jan 17. PMID 7530363, Free PMC Article
  4. Man's place in Hominoidea revealed by mitochondrial DNA genealogy. Horai S, et al. J Mol Evol, 1992 Jul. PMID 1518083

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
cytochrome c oxidase subunit I

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001644.1 Reference assembly

    Range
    5322..6863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_008201.1 cytochrome c oxidase subunit I (mitochondrion) [Pan paniscus]

    See identical proteins and their annotated locations for NP_008201.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9T9X0
    UniProtKB/TrEMBL
    E0XI71, E0XIC3
    Related
    ENSPPAP00000000003.1
    Conserved Domains (2) summary
    MTH00153
    Location:5 → 507
    COX1; cytochrome c oxidase subunit I; Provisional
    pfam00115
    Location:14 → 460
    COX1; Cytochrome C and Quinol oxidase polypeptide I
Nucleotide Protein
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