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LOC8072245 rho GTPase-activating protein 7 [ Sorghum bicolor (sorghum) ]

Gene ID: 8072245, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8072245
Gene description
rho GTPase-activating protein 7
Locus tag
SORBI_3002G402600
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8072245 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 2 NC_012871.2 (75283479..75291209)

Chromosome 2 - NC_012871.2Genomic Context describing neighboring genes Neighboring gene non-specific lipid-transfer protein C6 Neighboring gene uncharacterized LOC8072244 Neighboring gene ferredoxin-dependent glutamate synthase, chloroplastic Neighboring gene uncharacterized LOC8072246

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012871.2 Chromosome 2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012871.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    75283479..75291209
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021452706.1 → XP_021308381.1  rho GTPase-activating protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A1W0W7T2, A0A921RU39
    Conserved Domains (4) summary
    smart00233
    Location:26 → 132
    PH; Pleckstrin homology domain
    COG3064
    Location:497 → 666
    TolA; Membrane protein involved in colicin uptake [Cell wall/membrane/envelope biogenesis]
    pfam00620
    Location:188 → 327
    RhoGAP; RhoGAP domain
    pfam14389
    Location:604 → 683
    Lzipper-MIP1; Leucine-zipper of ternary complex factor MIP1

  2. XM_002461106.2 → XP_002461151.1  rho GTPase-activating protein 7 isoform X1

    See identical proteins and their annotated locations for XP_002461151.1

    UniProtKB/TrEMBL
    A0A1W0W7T2, A0A921RU03, C5X467
    Conserved Domains (4) summary
    smart00233
    Location:26 → 132
    PH; Pleckstrin homology domain
    COG3064
    Location:497 → 666
    TolA; Membrane protein involved in colicin uptake [Cell wall/membrane/envelope biogenesis]
    pfam00620
    Location:188 → 327
    RhoGAP; RhoGAP domain
    pfam14389
    Location:604 → 683
    Lzipper-MIP1; Leucine-zipper of ternary complex factor MIP1
Nucleotide Protein
Heading Accession and Version

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