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LOC8070471 flotillin-like protein 1 [ Sorghum bicolor (sorghum) ]

Gene ID: 8070471, updated on 22-Oct-2023

Summary

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Gene symbol
LOC8070471
Gene description
flotillin-like protein 1
Locus tag
SORBI_3001G216500
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8070471 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 1 NC_012870.2 (20033754..20038875, complement)

Chromosome 1 - NC_012870.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC8067136 Neighboring gene flotillin-like protein 2 Neighboring gene uncharacterized LOC8070472 Neighboring gene uncharacterized LOC8070473 Neighboring gene uncharacterized LOC8070474

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012870.2 Chromosome 1 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
flotillin-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012870.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    20033754..20038875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002467020.2 → XP_002467065.1  flotillin-like protein 1

    See identical proteins and their annotated locations for XP_002467065.1

    UniProtKB/TrEMBL
    A0A921RYU3, C5WYC7
    Conserved Domains (2) summary
    COG2268
    Location:1 → 373
    YqiK; Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain [Function unknown]
    cd03399
    Location:31 → 178
    SPFH_flotillin; Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
Nucleotide Protein
Heading Accession and Version

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