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crygm2d16 crystallin, gamma M2d16 [ Danio rerio (zebrafish) ]

Gene ID: 798701, updated on 9-Dec-2024

Summary

Official Symbol
crygm2d16provided by ZNC
Official Full Name
crystallin, gamma M2d16provided by ZNC
Primary source
ZFIN:ZDB-GENE-071004-53
See related
Ensembl:ENSDARG00000076790 AllianceGenome:ZFIN:ZDB-GENE-071004-53
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:173495; si:ch211-55g3.6
Summary
Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens. [provided by Alliance of Genome Resources, Dec 2024]
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Genomic context

See crygm2d16 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (22157468..22158286, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (22346605..22347415, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene crystallin, gamma M2d8 Neighboring gene crystallin, gamma M2d14 Neighboring gene crystallin, gamma M2d6 Neighboring gene crystallin, gamma M2d19

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC173495

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of eye lens IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in lens development in camera-type eye IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in visual perception IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
crystallin, gamma M2d16
Names
crygmd16

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001103134.1NP_001096604.1  crystallin, gamma M2d16

    See identical proteins and their annotated locations for NP_001096604.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152087
    UniProtKB/TrEMBL
    A0A8M1NEM3, A7MC89, Q6IQK6
    Related
    ENSDARP00000099283.3, ENSDART00000114568.4
    Conserved Domains (1) summary
    pfam00030
    Location:91170
    Crystall; Beta/Gamma crystallin

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    22157468..22158286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068223486.1XP_068079587.1  crystallin, gamma M2d16 isoform X1

    UniProtKB/TrEMBL
    Q6IQK6
    Related
    ENSDART00000146188.2