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C7Y58_RS04175 LytTR family DNA-binding domain-containing protein [ Fusobacterium nucleatum subsp. nucleatum ATCC 25586 ]

Gene ID: 79783237, updated on 23-Sep-2024

Summary

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Gene symbol
C7Y58_RS04175
Gene description
LytTR family DNA-binding domain-containing protein
Locus tag
C7Y58_RS04175
Gene type
protein coding
Organism
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 (strain: ATCC 25586, nat-host: Homo sapiens, sub-species: nucleatum, culture-collection: ATCC:25586, type-material: type strain of Fusobacterium nucleatum)
Lineage
Bacteria; Fusobacteriota; Fusobacteriia; Fusobacteriales; Fusobacteriaceae; Fusobacterium
Old locus tag
C7Y58_04170
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Genomic context

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NZ_CP028101.1Genomic Context describing neighboring genes Neighboring gene SDR family oxidoreductase Neighboring gene Crp/Fnr family transcriptional regulator Neighboring gene gamma-glutamyl-gamma-aminobutyrate hydrolase family protein Neighboring gene sensor histidine kinase Neighboring gene carbon starvation protein A Neighboring gene MFS transporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP028101.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence and analysis of the oral bacterium Fusobacterium nucleatum strain ATCC 25586. Kapatral V, et al. J Bacteriol, 2002 Apr. PMID 11889109, Free PMC Article
  2. A novel type of conserved DNA-binding domain in the transcriptional regulators of the AlgR/AgrA/LytR family. Nikolskaya AN, et al. Nucleic Acids Res, 2002 Jun 1. PMID 12034833, Free PMC Article
  3. Structural classification of bacterial response regulators: diversity of output domains and domain combinations. Galperin MY. J Bacteriol, 2006 Jun. PMID 16740923, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LytTR family DNA-binding domain-containing protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP028101.1 Reference assembly

    Range
    842686..843408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_005902128.1 LytTR family DNA-binding domain-containing protein [Fusobacterium nucleatum]

    See identical proteins and their annotated locations for WP_005902128.1

    UniProtKB/TrEMBL
    A0A0M4S1B9, D5RAY8, Q8RGR6
    Conserved Domains (1) summary
    COG3279
    Location:1 → 238
    LytT; DNA-binding response regulator, LytR/AlgR family [Transcription, Signal transduction mechanisms]
Nucleotide Protein
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