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tmsb5 thymosin beta 5 [ Danio rerio (zebrafish) ]

Gene ID: 796588, updated on 4-Jan-2025

Summary

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Official Symbol
tmsb5provided by ZNC
Official Full Name
thymosin beta 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-090313-198
See related
Ensembl:ENSDARG00000093886 AllianceGenome:ZFIN:ZDB-GENE-090313-198
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
Tbeta-b; si:dkey-167i21.2
Summary
Orthologous to human TMSB15A (thymosin beta 15A) and TMSB15B (thymosin beta 15B). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See tmsb5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (18810891..18811487, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (18117954..18118550, complement)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 Neighboring gene phosphoglucomutase 2 Neighboring gene solute carrier family 25 member 51a Neighboring gene uncharacterized LOC100535985

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Vertebrate beta-thymosins: conserved synteny reveals the relationship between those of bony fish and of land vertebrates. Edwards J. FEBS Lett, 2010 Mar 5. PMID 20138884
  2. Transcriptomic analyses reveal novel genes with sexually dimorphic expression in the zebrafish gonad and brain. Sreenivasan R, et al. PLoS One, 2008 Mar 12. PMID 18335061, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • thymosin beta-b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015622.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    BC159109
    Related
    ENSDART00000142026.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    18810891..18811487 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.