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si:dkey-211g8.4 si:dkey-211g8.4 [ Danio rerio (zebrafish) ]

Gene ID: 793729, updated on 4-Jan-2025

Summary

Official Symbol
si:dkey-211g8.4provided by ZNC
Official Full Name
si:dkey-211g8.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-624
See related
AllianceGenome:ZFIN:ZDB-GENE-060503-624
Gene type
unknown
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable DNA binding activity. Predicted to be involved in chromosome organization. Predicted to be active in condensed chromosome and nucleus. [provided by Alliance of Genome Resources, Jan 2025]
Orthologs

Genomic context

See si:dkey-211g8.4 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (10586242..10588607)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (10659571..10668990)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene lens intrinsic membrane protein 2.4 Neighboring gene upstream transcription factor 2, c-fos interacting Neighboring gene si:dkey-211g8.5 Neighboring gene si:dkey-211g8.8

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in chromosome organization IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in condensed chromosome IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    10586242..10588607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_011007520.1 RNA Sequence