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Calcium-dependent lipid-binding (CaLB domain) family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 7922407, updated on 18-Sep-2024

Summary

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Official Full Name
Calcium-dependent lipid-binding (CaLB domain) family protein
Primary source
TAIR:AT2G40815
Locus tag
AT2G40815
See related
Araport:AT2G40815
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_003071.7 (17034541..17036281, complement)

Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene autophagy-like protein Neighboring gene ncRNA Neighboring gene stomatal closure actin-binding-like protein Neighboring gene RING-H2 finger C1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003071.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001161094.2
NM_001336867.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Calcium-dependent lipid-binding (CaLB domain) family protein
NP_001154566.1
  • Calcium-dependent lipid-binding (CaLB domain) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); Has 2829 Blast hits to 2399 proteins in 295 species: Archae - 0; Bacteria - 112; Metazoa - 998; Fungi - 464; Plants - 875; Viruses - 39; Other Eukaryotes - 341 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003071.7 Reference assembly

    Range
    17034541..17036281 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001161094.2 → NP_001154566.1  Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001154566.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9X5V9, A0A654F1Z8, F4IIZ8
    Conserved Domains (1) summary
    cd04051
    Location:6 → 141
    C2_SRC2_like; C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins

  2. NM_001336867.1 → NP_001324651.1  Calcium-dependent lipid-binding (CaLB domain) family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B0P5, A0A654F1Z8
Nucleotide Protein
Heading Accession and Version

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