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4930578E11Rik RIKEN cDNA 4930578E11 gene [ Mus musculus (house mouse) ]

Gene ID: 78058, updated on 17-Aug-2024

Summary

Official Symbol
4930578E11Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930578E11 geneprovided by MGI
Primary source
MGI:MGI:1925308
See related
Ensembl:ENSMUSG00000117618 AllianceGenome:MGI:1925308
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 1.2) See more
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Genomic context

See 4930578E11Rik in Genome Data Viewer
Location:
18; 18 A2- B1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (29529769..29629469, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (29396716..29496416, complement)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930474G06 gene Neighboring gene STARR-seq mESC enhancer starr_44114 Neighboring gene predicted gene, 33948 Neighboring gene STARR-seq mESC enhancer starr_44115 Neighboring gene STARR-seq mESC enhancer starr_44116 Neighboring gene STARR-seq mESC enhancer starr_44117 Neighboring gene predicted gene, 34743 Neighboring gene RIKEN cDNA 4930527G23 gene Neighboring gene predicted gene, 34136 Neighboring gene predicted gene, 34182

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045391.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK132929
    Related
    ENSMUST00000234588.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    29529769..29629469 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)