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miaB tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [ Pseudomonas syringae ]

Gene ID: 77280189, updated on 10-Oct-2024

Summary

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Gene symbol
miaB
Gene description
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
Locus tag
KIJ28_RS21130
Gene type
protein coding
Organism
Pseudomonas syringae (strain: Susan2139, nat-host: Medicago sativa)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
Old locus tag
KIJ28_21130
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Genomic context

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NZ_CP074578.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein Neighboring gene DUF1820 family protein Neighboring gene PhoH family protein Neighboring gene HlyC/CorC family transporter Neighboring gene rRNA maturation RNase YbeY

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP074578.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MiaB protein from Thermotoga maritima. Characterization of an extremely thermophilic tRNA-methylthiotransferase. Pierrel F, et al. J Biol Chem, 2003 Aug 8. PMID 12766153
  2. Enzymatic modification of tRNAs: MiaB is an iron-sulfur protein. Pierrel F, et al. J Biol Chem, 2002 Apr 19. PMID 11882645
  3. Identification of the miaB gene, involved in methylthiolation of isopentenylated A37 derivatives in the tRNA of Salmonella typhimurium and Escherichia coli. Esberg B, et al. J Bacteriol, 1999 Dec. PMID 10572129, Free PMC Article
  4. TRAM, a predicted RNA-binding domain, common to tRNA uracil methylation and adenine thiolation enzymes. Anantharaman V, et al. FEMS Microbiol Lett, 2001 Apr 13. PMID 11313137

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
WP_003368786.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP074578.1 Reference assembly

    Range
    4796209..4797537
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_003368786.1 MULTISPECIES: tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB [Pseudomonas]

    See identical proteins and their annotated locations for WP_003368786.1

    UniProtKB/Swiss-Prot
    Q4ZN97
    UniProtKB/TrEMBL
    A0A0L8IX51, A0A0N0VTK4, A0A0N8QBD7, A0A0P9TJ65, A0A0Q0A4W8, A0A0Q0FGV5, A0A193SX52, A0A1G9SZ38, A0A3M5WYB6, A0A8T8LVC6, A0AAN1V5M2, A0AAQ2T9Z9
    Conserved Domains (1) summary
    PRK14325
    Location:1 → 441
    PRK14325; (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional
Nucleotide Protein
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