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ATOH8 atonal bHLH transcription factor 8 [ Gallus gallus (chicken) ]

Gene ID: 771738, updated on 17-Aug-2024

Summary

Symbol
ATOH8provided by CGNC
Full Name
atonal bHLH transcription factor 8provided by CGNC
Primary source
CGNC:66672
See related
Ensembl:ENSGALG00010017718
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See ATOH8 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (84824500..84850237)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (84802278..84828018)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110770 Neighboring gene uncharacterized LOC121110771 Neighboring gene fibroblast growth factor receptor-like 1 Neighboring gene microRNA 6705 Neighboring gene uncharacterized LOC124417968 Neighboring gene uncharacterized LOC107053313 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 5 Neighboring gene RNA polymerase I subunit A

Genomic regions, transcripts, and products

General protein information

Preferred Names
transcription factor ATOH8; protein atonal homolog 8
Names
atonal homolog 8 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001397230.1NP_001384159.1  transcription factor ATOH8

    Status: VALIDATED

    Source sequence(s)
    BU250429, BU399998, FN868883, JAENSK010000074
    UniProtKB/TrEMBL
    A0A8V0ZA38, D7GLD5
    Related
    ENSGALP00010025332.1, ENSGALT00010042842.1
    Conserved Domains (1) summary
    cd11421
    Location:124191
    bHLH_TS_ATOH8; basic helix-loop-helix (bHLH) domain found in protein atonal homolog 8 (ATOH8) and similar proteins

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    84824500..84850237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040699655.2XP_040555589.2  protein atonal homolog 8 isoform X1

  2. XM_046940352.1XP_046796308.1  protein atonal homolog 8 isoform X3

  3. XM_046940351.1XP_046796307.1  protein atonal homolog 8 isoform X2

RNA

  1. XR_005859475.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    84802278..84828018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040671707.2XP_040527641.2  protein atonal homolog 8 isoform X4

  2. XM_046916576.1XP_046772532.1  protein atonal homolog 8 isoform X6

  3. XM_046916575.1XP_046772531.1  protein atonal homolog 8 isoform X5

RNA

  1. XR_005850079.2 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001177739.1: Suppressed sequence

    Description
    NM_001177739.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.