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Erp44 endoplasmic reticulum protein 44 [ Mus musculus (house mouse) ]

Gene ID: 76299, updated on 27-Nov-2024

Summary

Official Symbol
Erp44provided by MGI
Official Full Name
endoplasmic reticulum protein 44provided by MGI
Primary source
MGI:MGI:1923549
See related
Ensembl:ENSMUSG00000028343 AllianceGenome:MGI:1923549
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Txndc4; 1110001E24Rik
Summary
Predicted to enable protein disulfide isomerase activity. Predicted to be involved in several processes, including protein folding; response to endoplasmic reticulum stress; and response to unfolded protein. Located in cell surface. Is expressed in several structures, including heart and pericardium; jaw; and orbito-sphenoid. Orthologous to human ERP44 (endoplasmic reticulum protein 44). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Ubiquitous expression in placenta adult (RPKM 31.9), adrenal adult (RPKM 18.5) and 28 other tissues See more
Orthologs
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Genomic context

See Erp44 in Genome Data Viewer
Location:
4 B1; 4 26.09 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (48190711..48279635, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (48190711..48279635, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_10152 Neighboring gene nuclear receptor subfamily 4, group A, member 3 Neighboring gene STARR-positive B cell enhancer ABC_E2691 Neighboring gene syntaxin 17 Neighboring gene STARR-seq mESC enhancer starr_10154 Neighboring gene STARR-positive B cell enhancer ABC_E6176 Neighboring gene microRNA 1958 Neighboring gene STARR-positive B cell enhancer ABC_E6177 Neighboring gene STARR-seq mESC enhancer starr_10155 Neighboring gene STARR-positive B cell enhancer ABC_E1644 Neighboring gene STARR-seq mESC enhancer starr_10157 Neighboring gene inversin Neighboring gene heterogeneous nuclear ribonucleoprotein F pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E6178 Neighboring gene testis expressed gene 10

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Chemically induced (ENU) (1) 
  • Endonuclease-mediated (1) 
  • Gene trapped (1) 
  • Targeted (3)  1 citation

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein disulfide isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables protein disulfide isomerase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein disulfide isomerase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in glycoprotein metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in glycoprotein metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein folding IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein folding ISO
Inferred from Sequence Orthology
more info
 
involved_in protein folding ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to endoplasmic reticulum stress ISO
Inferred from Sequence Orthology
more info
 
involved_in response to endoplasmic reticulum stress ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within response to unfolded protein ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in response to unfolded protein ISO
Inferred from Sequence Orthology
more info
 
involved_in response to unfolded protein ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cell surface IDA
Inferred from Direct Assay
more info
PubMed 
located_in cell surface ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum lumen ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in endoplasmic reticulum lumen ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in endoplasmic reticulum membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in endoplasmic reticulum-Golgi intermediate compartment IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 
located_in endoplasmic reticulum-Golgi intermediate compartment ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
endoplasmic reticulum resident protein 44
Names
ER protein 44
endoplasmic reticulum resident protein 44kDa
endoplasmic reticulum resident protein ERp44
thioredoxin domain containing 4 (endoplasmic reticulum)
thioredoxin domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355184.1NP_001342113.1  endoplasmic reticulum resident protein 44 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AA000229, AA434854, AK003217, AK141377, AL844861, BP759191, BY091518
    Conserved Domains (3) summary
    cd03070
    Location:52142
    PDI_b_ERp44; PDIb family, ERp44 subfamily, first redox inactive TRX-like domain b; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif followed ...
    cd03072
    Location:153263
    PDI_b'_ERp44; PDIb' family, ERp44 subfamily, second redox inactive TRX-like domain b'; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif ...
    cl00388
    Location:444
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
  2. NM_029572.3NP_083848.1  endoplasmic reticulum resident protein 44 isoform 1 precursor

    See identical proteins and their annotated locations for NP_083848.1

    Status: VALIDATED

    Source sequence(s)
    AA000229, AA434854, AK003217, AK141377, AK151497, AL844861, BP759191
    Consensus CDS
    CCDS18165.1
    UniProtKB/Swiss-Prot
    Q3TVI1, Q6A045, Q9D1Q6
    UniProtKB/TrEMBL
    Q3URM4
    Related
    ENSMUSP00000030028.5, ENSMUST00000030028.5
    Conserved Domains (3) summary
    cd02996
    Location:29136
    PDI_a_ERp44; PDIa family, endoplasmic reticulum protein 44 (ERp44) subfamily; ERp44 is an ER-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain, similar to that of PDIa, with a CXFS motif followed by ...
    cd03070
    Location:144234
    PDI_b_ERp44; PDIb family, ERp44 subfamily, first redox inactive TRX-like domain b; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif followed ...
    cd03072
    Location:245355
    PDI_b'_ERp44; PDIb' family, ERp44 subfamily, second redox inactive TRX-like domain b'; ERp44 is an endoplasmic reticulum (ER)-resident protein, induced during stress, involved in thiol-mediated ER retention. It contains an N-terminal TRX domain with a CXFS motif ...

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    48190711..48279635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)