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4930579P08Rik RIKEN cDNA 4930579P08 gene [ Mus musculus (house mouse) ]

Gene ID: 75878, updated on 22-Oct-2024

Summary

Official Symbol
4930579P08Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930579P08 geneprovided by MGI
Primary source
MGI:MGI:1923128
See related
Ensembl:ENSMUSG00000112924 AllianceGenome:MGI:1923128
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 1.5) See more
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Genomic context

See 4930579P08Rik in Genome Data Viewer
Location:
10; 10 D2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (116565158..116575665)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (116729253..116739760)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_27962 Neighboring gene predicted gene, 26579 Neighboring gene STARR-seq mESC enhancer starr_27963 Neighboring gene RIKEN cDNA 1700030O20 gene Neighboring gene STARR-positive B cell enhancer mm9_chr10:116183775-116184076 Neighboring gene myelin regulatory factor-like Neighboring gene STARR-seq mESC enhancer starr_27965 Neighboring gene STARR-seq mESC enhancer starr_27966 Neighboring gene RAB3A interacting protein Neighboring gene predicted gene, 51782

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_131036.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK016333
    Related
    ENSMUST00000218193.3

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    116565158..116575665
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)