U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Speer4a1 spermatogenesis associated glutamate (E)-rich protein 4A1 [ Mus musculus (house mouse) ]

Gene ID: 75657, updated on 27-Nov-2024

Summary

Official Symbol
Speer4a1provided by MGI
Official Full Name
spermatogenesis associated glutamate (E)-rich protein 4A1provided by MGI
Primary source
MGI:MGI:1922907
See related
Ensembl:ENSMUSG00000073119 AllianceGenome:MGI:1922907
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Speer4a; SPEER-4A; 1700027N01Rik
Expression
Biased expression in testis adult (RPKM 2.0), ovary adult (RPKM 1.6) and 4 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Speer4a1 in Genome Data Viewer
Location:
5 B1; 5 12.44 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (26239268..26244503, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (26034270..26039505, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene ribosome biogenesis regulatory protein homolog Neighboring gene predicted gene 5862 Neighboring gene STARR-positive B cell enhancer mm9_chr5:26361061-26361362 Neighboring gene predicted gene 7347 Neighboring gene RRS1 ribosome biogenesis regulator homolog pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
spermatogenesis associated glutamate (E)-rich protein 4a
Names
sperm-associated glutamate (E)-rich protein 4a
spermatogenic-associated glutamate (E)-rich protein 4a

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029376.2NP_083652.2  spermatogenesis associated glutamate (E)-rich protein 4a

    See identical proteins and their annotated locations for NP_083652.2

    Status: VALIDATED

    Source sequence(s)
    AC125090, AK006439
    Consensus CDS
    CCDS51441.1
    UniProtKB/TrEMBL
    F8VPX6, Q9D9V5
    Related
    ENSMUSP00000078415.3, ENSMUST00000079447.4
    Conserved Domains (1) summary
    pfam04822
    Location:52133
    Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    26239268..26244503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)