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ybiV sugar-phosphatase YbiV [ Shigella boydii ]

Gene ID: 75204713, updated on 3-Dec-2024

Summary

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Gene symbol
ybiV
Gene description
sugar-phosphatase YbiV
Locus tag
CEH00_RS15020
Gene type
protein coding
Organism
Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Old locus tag
CEH00_15055
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Genomic context

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NZ_NIYS01000096.1Genomic Context describing neighboring genes Neighboring gene glycyl-radical enzyme activating protein Neighboring gene glycyl radical protein Neighboring gene DUF1479 domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_NIYS01000096.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. YbiV from Escherichia coli K12 is a HAD phosphatase. Roberts A, et al. Proteins, 2005 Mar 1. PMID 15657928
  2. Enzyme genomics: Application of general enzymatic screens to discover new enzymes. Kuznetsova E, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808744
  3. Genome-wide analysis of substrate specificities of the Escherichia coli haloacid dehalogenase-like phosphatase family. Kuznetsova E, et al. J Biol Chem, 2006 Nov 24. PMID 16990279

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sugar-phosphatase YbiV
WP_000114244.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_NIYS01000096.1 Reference assembly

    Range
    40006..40821
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_000114244.1 MULTISPECIES: sugar-phosphatase YbiV [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_000114244.1

    UniProtKB/TrEMBL
    A0A066Q305, A0A0E0Y1Y1, A0A7Z8GJL5, A0A836NDA9, A0A8B3KJK5, A0A8E0FSD2, A0A9Q5XY14, A0AA35ACH2, A0AAD2Z9F1, A0AAD2ZD32, A0AAN1S2Z3, A7ZJN9, B7LCA5, E0J5W8
    Conserved Domains (1) summary
    cd07518
    Location:4 → 260
    HAD_YbiV-Like; Escherichia coli YbiV sugar phosphatase/phosphotransferase and related proteins; belongs to the haloacid dehalogenase-like superfamily
Nucleotide Protein
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