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4930543I03Rik RIKEN cDNA 4930543I03 gene [ Mus musculus (house mouse) ]

Gene ID: 75160, updated on 17-Aug-2024

Summary

Official Symbol
4930543I03Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930543I03 geneprovided by MGI
Primary source
MGI:MGI:1922410
See related
AllianceGenome:MGI:1922410
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 3.5) See more
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Genomic context

See 4930543I03Rik in Genome Data Viewer
Location:
15; 15 E2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (86588367..86602704)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (86704157..86766134)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2810001A02 gene Neighboring gene STARR-positive B cell enhancer ABC_E7404 Neighboring gene STARR-seq mESC enhancer starr_39415 Neighboring gene TBC1 domain family, member 22a Neighboring gene STARR-seq mESC enhancer starr_39416 Neighboring gene STARR-seq mESC enhancer starr_39418 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:86165311-86165512 Neighboring gene CapStarr-seq enhancer MGSCv37_chr15:86216802-86216911 Neighboring gene STARR-seq mESC enhancer starr_39419 Neighboring gene predicted gene, 34965 Neighboring gene predicted gene, 35118 Neighboring gene predicted gene, 52184 Neighboring gene predicted gene, 35284

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_175345.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC158974

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    86588367..86602704
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)