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G542_RS0101850 sigma-54-dependent Fis family transcriptional regulator [ Laribacter hongkongensis DSM 14985 ]

Gene ID: 75108462, updated on 4-Sep-2023

Summary

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Gene symbol
G542_RS0101850
Gene description
sigma-54-dependent Fis family transcriptional regulator
Locus tag
G542_RS0101850
Gene type
protein coding
Organism
Laribacter hongkongensis DSM 14985 (strain: DSM 14985, nat-host: Homo sapiens, culture-collection: DSM:14985, type-material: type strain of Laribacter hongkongensis)
Lineage
Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Aquaspirillaceae; Laribacter
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Genomic context

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NZ_AUHR01000002.1Genomic Context describing neighboring genes Neighboring gene cytochrome d ubiquinol oxidase subunit II Neighboring gene cytochrome ubiquinol oxidase subunit I Neighboring gene cytochrome oxidase putative small subunit CydP Neighboring gene CYTH domain-containing protein Neighboring gene Na+/H+ antiporter NhaC family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_AUHR01000002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
sigma-54-dependent Fis family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_AUHR01000002.1 Reference assembly

    Range
    68228..69523
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012697719.1 sigma-54-dependent Fis family transcriptional regulator [Laribacter hongkongensis]

    See identical proteins and their annotated locations for WP_012697719.1

    UniProtKB/TrEMBL
    C1DAB8
    Conserved Domains (2) summary
    COG2204
    Location:114 → 420
    AtoC; DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains [Signal transduction mechanisms]
    pfam08448
    Location:12 → 117
    PAS_4; PAS fold