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LOC7494677 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7494677, updated on 26-Jun-2024

Summary

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Gene symbol
LOC7494677
Gene description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2
Locus tag
POPTR_005G248600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7494677 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 5 NC_037289.2 (24260070..24262481)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 5 NC_037289.1 (25188090..25190569)

Chromosome 5 - NC_037289.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7494675 Neighboring gene probable CoA ligase CCL5 Neighboring gene uncharacterized LOC7485631 Neighboring gene cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037289.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    24260070..24262481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002306932.4 → XP_002306968.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2

    See identical proteins and their annotated locations for XP_002306968.1

    UniProtKB/TrEMBL
    B9H5F0

  2. XM_006383700.3 → XP_006383762.1  NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2

    See identical proteins and their annotated locations for XP_006383762.1

    UniProtKB/TrEMBL
    B9H5F0
Nucleotide Protein
Heading Accession and Version

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