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LOC7465468 protein ENHANCED DISEASE RESISTANCE 2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7465468, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7465468
Gene description
protein ENHANCED DISEASE RESISTANCE 2
Locus tag
POPTR_003G100600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7465468 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 3 NC_037287.2 (12554498..12565672, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 3 NC_037287.1 (12631699..12642864, complement)

Chromosome 3 - NC_037287.2Genomic Context describing neighboring genes Neighboring gene protein LPA3 Neighboring gene crocetin glucosyltransferase 3 Neighboring gene uncharacterized LOC7491893 Neighboring gene growth-regulating factor 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ENHANCED DISEASE RESISTANCE 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037287.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    12554498..12565672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024597785.2 → XP_024453553.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X2

    Conserved Domains (1) summary
    PLN00188
    Location:1 → 721
    PLN00188; enhanced disease resistance protein (EDR2); Provisional

  2. XM_002304331.4 → XP_002304367.1  protein ENHANCED DISEASE RESISTANCE 2 isoform X1

    See identical proteins and their annotated locations for XP_002304367.1

    UniProtKB/TrEMBL
    A0A2K2B4N3, B9GZU7
    Conserved Domains (1) summary
    PLN00188
    Location:1 → 723
    PLN00188; enhanced disease resistance protein (EDR2); Provisional
Nucleotide Protein
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