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LOC7455968 tRNase Z TRZ2, chloroplastic [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7455968, updated on 31-May-2023

Summary

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Gene symbol
LOC7455968
Gene description
tRNase Z TRZ2, chloroplastic
Locus tag
POPTR_014G160600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Also known as
AT2G04530
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Genomic context

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See LOC7455968 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (11494695..11498073, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (12637326..12640702, complement)

Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7468537 Neighboring gene protein-tyrosine-phosphatase IBR5 Neighboring gene putative BPI/LBP family protein At1g04970 Neighboring gene uncharacterized LOC7455970

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Resolution of deep eudicot phylogeny and their temporal diversification using nuclear genes from transcriptomic and genomic datasets. Zeng L, et al. New Phytol, 2017 May. PMID 28294342

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tRNase Z TRZ2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    11494695..11498073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002321122.4 → XP_002321158.1  tRNase Z TRZ2, chloroplastic

    See identical proteins and their annotated locations for XP_002321158.1

    UniProtKB/TrEMBL
    B9IAM1
    Conserved Domains (1) summary
    cl23716
    Location:98 → 290
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
Nucleotide Protein
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