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LOC7455896 cellulose synthase A catalytic subunit 8 [UDP-forming] [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7455896, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7455896
Gene description
cellulose synthase A catalytic subunit 8 [UDP-forming]
Locus tag
POPTR_011G069600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Also known as
CesA1A
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Genomic context

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See LOC7455896 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 11 NC_037295.2 (6090232..6097154, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 11 NC_037295.1 (6493169..6500107, complement)

Chromosome 11 - NC_037295.2Genomic Context describing neighboring genes Neighboring gene SAP-like protein BP-73 Neighboring gene receptor-like protein 51 Neighboring gene uncharacterized LOC7455895 Neighboring gene uncharacterized LOC7463821

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Intron-mediated alternative splicing of WOOD-ASSOCIATED NAC TRANSCRIPTION FACTOR1B regulates cell wall thickening during fiber development in Populus species. Zhao Y, et al. Plant Physiol, 2014 Feb. PMID 24394777, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellulose synthase A catalytic subunit 8 [UDP-forming]

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037295.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    6090232..6097154 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002316779.4 → XP_002316815.1  cellulose synthase A catalytic subunit 8 [UDP-forming]

    See identical proteins and their annotated locations for XP_002316815.1

    UniProtKB/TrEMBL
    B9I1I4
    Conserved Domains (1) summary
    PLN02195
    Location:1 → 978
    PLN02195; cellulose synthase A
Nucleotide Protein
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