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LOC7453781 CRAL-TRIO domain-containing protein C3H8.02 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7453781, updated on 7-Apr-2023

Summary

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Gene symbol
LOC7453781
Gene description
CRAL-TRIO domain-containing protein C3H8.02
Locus tag
POPTR_015G080100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7453781 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
6
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 15 NC_037299.2 (10618977..10624592, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 15 NC_037299.1 (10498799..10504537, complement)

Chromosome 15 - NC_037299.2Genomic Context describing neighboring genes Neighboring gene probable apyrase 7 Neighboring gene uncharacterized LOC7457757 Neighboring gene plant UBX domain-containing protein 10 Neighboring gene uncharacterized LOC7453783

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
CRAL-TRIO domain-containing protein C3H8.02; phosphatidylinositol/phosphatidylcholine transfer protein SFH12; uncharacterized protein LOC7453781

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037299.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    10618977..10624592 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024586216.2 → XP_024441984.1  uncharacterized protein LOC7453781 isoform X3

    Conserved Domains (1) summary
    smart00516
    Location:64 → 207
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)

  2. XM_024586215.2 → XP_024441983.1  phosphatidylinositol/phosphatidylcholine transfer protein SFH12 isoform X2

    UniProtKB/TrEMBL
    A0A3N7GZN5
    Conserved Domains (1) summary
    cl15787
    Location:151 → 208
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

  3. XM_002322143.4 → XP_002322179.1  CRAL-TRIO domain-containing protein C3H8.02 isoform X1

    See identical proteins and their annotated locations for XP_002322179.1

    UniProtKB/TrEMBL
    B9IEV1
    Conserved Domains (1) summary
    smart00516
    Location:116 → 259
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
Nucleotide Protein
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