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CG42395 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 7354436, updated on 9-Dec-2024

Summary

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Official Symbol
CG42395provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0259741
Locus tag
Dmel_CG42395
See related
AllianceGenome:FB:FBgn0259741
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG42395
Summary
Predicted to be active in membrane. Orthologous to human TMEM256 (transmembrane protein 256). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs
all
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Genomic context

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See CG42395 in Genome Data Viewer
Location:
8E10-8E10; 1-28 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (9575126..9576247, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (9469159..9470280, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR42767 Neighboring gene Cubilin Neighboring gene Lysophosphatidylcholine acyltransferase Neighboring gene long non-coding RNA:CR45540 Neighboring gene long non-coding RNA:CR45541

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
  2. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  3. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article
  4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
  5. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG42395-PD
NP_001138182.3
  • unusual splice

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    9575126..9576247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144710.3 → NP_001138182.3  uncharacterized protein Dmel_CG42395 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001138182.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z137
    Conserved Domains (1) summary
    pfam04241
    Location:83 → 168
    DUF423; Protein of unknown function (DUF423)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B7Z137 B7Z137

Gene LinkOut

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