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Actrt2 actin-related protein T2 [ Mus musculus (house mouse) ]

Gene ID: 73353, updated on 13-Jan-2025

Summary

Official Symbol
Actrt2provided by MGI
Official Full Name
actin-related protein T2provided by MGI
Primary source
MGI:MGI:1920603
See related
Ensembl:ENSMUSG00000051276 AllianceGenome:MGI:1920603
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arpm2; Arp-T2; 1700052K15Rik
Summary
Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in actin cytoskeleton. Is expressed in Meckel's cartilage; liver lobe; and skeleton. Orthologous to human ACTRT2 (actin related protein T2). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See Actrt2 in Genome Data Viewer
Location:
4 E2; 4 84.69 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (154750885..154752324, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (154666428..154667867, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene Prdm16 opposite strand transcript Neighboring gene predicted gene 13110 Neighboring gene STARR-seq mESC enhancer starr_12237 Neighboring gene VISTA enhancer mm1492 Neighboring gene STARR-seq mESC enhancer starr_12238 Neighboring gene VISTA enhancer mm1088 Neighboring gene VISTA enhancer mm1090 Neighboring gene tetratricopeptide repeat domain 34 Neighboring gene STARR-positive B cell enhancer ABC_E6294 Neighboring gene STARR-seq mESC enhancer starr_12240 Neighboring gene STARR-positive B cell enhancer ABC_E2734 Neighboring gene predicted gene 13112 Neighboring gene membrane metallo-endopeptidase-like 1

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
actin-related protein T2
Names
actin related protein M2 (Arpm2)
actin-related protein M2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028513.3NP_082789.1  actin-related protein T2

    See identical proteins and their annotated locations for NP_082789.1

    Status: VALIDATED

    Source sequence(s)
    AK077010, BC052344, BU946350, BY446288
    Consensus CDS
    CCDS19014.1
    UniProtKB/Swiss-Prot
    Q9D9L5
    Related
    ENSMUSP00000050377.4, ENSMUST00000060062.5
    Conserved Domains (1) summary
    smart00268
    Location:10377
    ACTIN; Actin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    154750885..154752324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)