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L1P05_RS07805 tyrosine-type recombinase/integrase [ Edwardsiella piscicida ]

Gene ID: 72528457, updated on 3-Dec-2024

Summary

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Gene symbol
L1P05_RS07805
Gene description
tyrosine-type recombinase/integrase
Locus tag
L1P05_RS07805
Gene type
protein coding
Organism
Edwardsiella piscicida (strain: 18EpOKYJ, nat-host: Paralichthtys olivaceus (Olive flounder))
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Hafniaceae; Edwardsiella
Old locus tag
L1P05_07805
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Genomic context

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NZ_CP090968.1Genomic Context describing neighboring genes Neighboring gene ribbon-helix-helix domain-containing protein Neighboring gene tyrosine-type recombinase/integrase Neighboring gene excisionase Neighboring gene RecE family exodeoxyribonuclease Neighboring gene IS256-like element ISEic2 family transposase

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_CP090968.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Flexibility in DNA recombination: structure of the lambda integrase catalytic core. Kwon HJ, et al. Science, 1997 Apr 4. PMID 9082984, Free PMC Article
  2. Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse. Guo F, et al. Nature, 1997 Sep 4. PMID 9288963

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
tyrosine-type recombinase/integrase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_CP090968.1 Reference assembly

    Range
    1700937..1702031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_012848444.1 tyrosine-type recombinase/integrase [Edwardsiella piscicida]

    See identical proteins and their annotated locations for WP_012848444.1

    UniProtKB/TrEMBL
    A0AAQ3C5F5, A0AAU8PQV4
    Conserved Domains (3) summary
    pfam09003
    Location:13 → 60
    Arm-DNA-bind_1; Bacteriophage lambda integrase, Arm DNA-binding domain
    cl00213
    Location:193 → 355
    DNA_BRE_C; DNA breaking-rejoining enzymes, C-terminal catalytic domain
    cl12235
    Location:75 → 151
    Phage_int_SAM_1; Phage integrase, N-terminal SAM-like domain
Nucleotide Protein
Heading Accession and Version

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