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NUP188 nucleoporin 188 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 722580, updated on 17-Aug-2024

Summary

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Official Symbol
NUP188provided by VGNC
Official Full Name
nucleoporin 188provided by VGNC
Primary source
VGNC:VGNC:97798
See related
Ensembl:ENSMMUG00000011757
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See NUP188 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
45
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (11548494..11615305, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (9830365..9896991, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene mitoguardin 2 Neighboring gene SH3 domain containing GRB2 like, endophilin B2 Neighboring gene dolichol kinase Neighboring gene phytanoyl-CoA dioxygenase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore inner ring IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoporin NUP188 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    11548494..11615305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116654.2 → XP_014972140.2  nucleoporin NUP188 homolog isoform X1

    UniProtKB/TrEMBL
    F7HSL2, G7NFK8
    Related
    ENSMMUP00000015434.4, ENSMMUT00000016474.4
    Conserved Domains (1) summary
    pfam10487
    Location:45 → 955
    Nup188; Nucleoporin subcomplex protein binding to Pom34

  2. XM_028834737.1 → XP_028690570.1  nucleoporin NUP188 homolog isoform X2

    UniProtKB/TrEMBL
    H9F8R4
    Conserved Domains (1) summary
    pfam10487
    Location:1 → 747
    Nup188; Nucleoporin subcomplex protein binding to Pom34
Nucleotide Protein
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Research Materials