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BARHL1 BarH like homeobox 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 722313, updated on 17-Aug-2024

Summary

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Official Symbol
BARHL1provided by VGNC
Official Full Name
BarH like homeobox 1provided by VGNC
Primary source
VGNC:VGNC:104879
See related
Ensembl:ENSMMUG00000058445
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See BARHL1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 15 NC_041768.1 (7789176..7797348, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 15 NC_027907.1 (5882319..5890730, complement)

Chromosome 15 - NC_041768.1Genomic Context describing neighboring genes Neighboring gene sperm acrosome associated 9 Neighboring gene adenylate kinase 8 Neighboring gene uncharacterized LOC114672710 Neighboring gene general transcription factor IIIC subunit 4 Neighboring gene DEAD-box helicase 31 Neighboring gene cilia and flagella associated protein 77 Neighboring gene transcription termination factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
barH-like 1 homeobox protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041768.1 Reference Mmul_10 Primary Assembly

    Range
    7789176..7797348 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015116489.2 → XP_014971975.1  barH-like 1 homeobox protein

    UniProtKB/TrEMBL
    A0A5F8ATU3, G7NFH4
    Related
    ENSMMUP00000080518.1, ENSMMUT00000079441.1
    Conserved Domains (1) summary
    pfam00046
    Location:182 → 235
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials