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PER1 period circadian regulator 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 721948, updated on 17-Aug-2024

Summary

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Official Symbol
PER1provided by VGNC
Official Full Name
period circadian regulator 1provided by VGNC
Primary source
VGNC:VGNC:75942
See related
Ensembl:ENSMMUG00000021798
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PER1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
25
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 16 NC_041769.1 (7942485..7958479, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 16 NC_027908.1 (8159591..8175578, complement)

Chromosome 16 - NC_041769.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene vesicle associated membrane protein 2 Neighboring gene U8 small nucleolar RNA Neighboring gene transmembrane protein 107

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
period circadian protein homolog 1
Names
period circadian clock 1
period homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041769.1 Reference Mmul_10 Primary Assembly

    Range
    7942485..7958479 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015118551.2 → XP_014974037.2  period circadian protein homolog 1 isoform X5

    UniProtKB/TrEMBL
    G7NII4, H9FVS1, I0FSK9
    Related
    ENSMMUP00000047996.2, ENSMMUT00000063830.2
    Conserved Domains (2) summary
    pfam12114
    Location:1083 → 1222
    Period_C; Period protein 2/3C-terminal region
    pfam08447
    Location:373 → 457
    PAS_3; PAS fold

  2. XM_028835989.1 → XP_028691822.1  period circadian protein homolog 1 isoform X3

    UniProtKB/TrEMBL
    G7NII4, I0FSK9
    Conserved Domains (2) summary
    pfam12114
    Location:1132 → 1271
    Period_C; Period protein 2/3C-terminal region
    pfam08447
    Location:422 → 506
    PAS_3; PAS fold

  3. XM_015118550.2 → XP_014974036.2  period circadian protein homolog 1 isoform X4

    UniProtKB/TrEMBL
    G7NII4, I0FSK9
    Conserved Domains (2) summary
    pfam12114
    Location:1100 → 1239
    Period_C; Period protein 2/3C-terminal region
    pfam08447
    Location:450 → 534
    PAS_3; PAS fold

  4. XM_028835988.1 → XP_028691821.1  period circadian protein homolog 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QIX4
    Conserved Domains (2) summary
    pfam12114
    Location:1160 → 1299
    Period_C; Period protein 2/3C-terminal region
    pfam08447
    Location:450 → 534
    PAS_3; PAS fold

  5. XM_015118549.2 → XP_014974035.2  period circadian protein homolog 1 isoform X1

    UniProtKB/TrEMBL
    F7ESU2, G7NII4, I0FSK9
    Related
    ENSMMUP00000028711.4, ENSMMUT00000030676.4
    Conserved Domains (2) summary
    pfam12114
    Location:1160 → 1299
    Period_C; Period protein 2/3C-terminal region
    pfam08447
    Location:450 → 534
    PAS_3; PAS fold
Nucleotide Protein
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