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TSPAN9 tetraspanin 9 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 721790, updated on 17-Aug-2024

Summary

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Official Symbol
TSPAN9provided by VGNC
Official Full Name
tetraspanin 9provided by VGNC
Primary source
VGNC:VGNC:100115
See related
Ensembl:ENSMMUG00000009251
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See TSPAN9 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 11 NC_041764.1 (3195509..3404708)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 11 NC_027903.1 (3229698..3435500)

Chromosome 11 - NC_041764.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene TUB like protein 3 Neighboring gene TEA domain transcription factor 4 Neighboring gene uncharacterized LOC100430701 Neighboring gene uncharacterized LOC114670764 Neighboring gene uncharacterized LOC114670765

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetraspanin-9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041764.1 Reference Mmul_10 Primary Assembly

    Range
    3195509..3404708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028829167.1 → XP_028685000.1  tetraspanin-9 isoform X2

    UniProtKB/TrEMBL
    H9F8L6, H9YXY5
    Conserved Domains (2) summary
    cd03165
    Location:105 → 202
    NET-5_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
    pfam00335
    Location:9 → 226
    Tetraspannin; Tetraspanin family

  2. XM_028829166.1 → XP_028684999.1  tetraspanin-9 isoform X2

    UniProtKB/TrEMBL
    H9F8L6, H9YXY5
    Conserved Domains (2) summary
    cd03165
    Location:105 → 202
    NET-5_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
    pfam00335
    Location:9 → 226
    Tetraspannin; Tetraspanin family

  3. XM_015150844.2 → XP_015006330.1  tetraspanin-9 isoform X2

    UniProtKB/TrEMBL
    H9F8L6, H9YXY5
    Conserved Domains (2) summary
    cd03165
    Location:105 → 202
    NET-5_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
    pfam00335
    Location:9 → 226
    Tetraspannin; Tetraspanin family

  4. XM_015150842.2 → XP_015006328.1  tetraspanin-9 isoform X1

    UniProtKB/TrEMBL
    A0A1D5R977
    Related
    ENSMMUP00000056868.1, ENSMMUT00000012929.4
    Conserved Domains (2) summary
    cd03165
    Location:196 → 293
    NET-5_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
    pfam00335
    Location:100 → 317
    Tetraspannin; Tetraspanin family
Nucleotide Protein
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