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PRPF31 pre-mRNA processing factor 31 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 720567, updated on 17-Aug-2024

Summary

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Official Symbol
PRPF31provided by VGNC
Official Full Name
pre-mRNA processing factor 31provided by VGNC
Primary source
VGNC:VGNC:76262
Locus tag
EGK_11034
See related
Ensembl:ENSMMUG00000022297
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PRPF31 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (53868775..53887530)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (49451798..49471574)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene osteoclast associated Ig-like receptor Neighboring gene NADH:ubiquinone oxidoreductase subunit A3 Neighboring gene TCF3 fusion partner Neighboring gene uncharacterized LOC114674056 Neighboring gene uncharacterized LOC114674055 Neighboring gene CCR4-NOT transcription complex subunit 3 Neighboring gene uncharacterized LOC114674057 Neighboring gene leukocyte receptor cluster member 1 Neighboring gene transmembrane channel like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal tri-snRNP complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of precatalytic spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
U4/U6 small nuclear ribonucleoprotein Prp31
Names
PRP31 pre-mRNA processing factor 31 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001266103.2 → NP_001253032.1  U4/U6 small nuclear ribonucleoprotein Prp31

    See identical proteins and their annotated locations for NP_001253032.1

    Status: PROVISIONAL

    Source sequence(s)
    JV043625
    UniProtKB/TrEMBL
    A0A5F7ZG99, A0A8J8XHU2, F6X6X6, G7NN59
    Related
    ENSMMUP00000029349.2, ENSMMUT00000031367.4
    Conserved Domains (2) summary
    pfam01798
    Location:100 → 330
    Nop; snoRNA binding domain, fibrillarin
    pfam09785
    Location:337 → 465
    Prp31_C; Prp31 C terminal domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    53868775..53887530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838561.1 → XP_028694394.1  U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZG99
    Related
    ENSMMUP00000064234.1, ENSMMUT00000109045.1
    Conserved Domains (2) summary
    pfam01798
    Location:99 → 329
    Nop; snoRNA binding domain, fibrillarin
    pfam09785
    Location:337 → 493
    Prp31_C; Prp31 C terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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