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KCNN1 potassium calcium-activated channel subfamily N member 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 720091, updated on 17-Aug-2024

Summary

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Official Symbol
KCNN1provided by VGNC
Official Full Name
potassium calcium-activated channel subfamily N member 1provided by VGNC
Primary source
VGNC:VGNC:74002
See related
Ensembl:ENSMMUG00000007398
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See KCNN1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
14
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (17473833..17522800)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (17954397..18002505)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ATP synthase subunit f, mitochondrial pseudogene Neighboring gene coiled-coil domain containing 124 Neighboring gene arrestin domain containing 2 Neighboring gene NAD(P)H-hydrate epimerase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables small conductance calcium-activated potassium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small conductance calcium-activated potassium channel protein 1
Names
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    17473833..17522800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838958.1 → XP_028694791.1  small conductance calcium-activated potassium channel protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A5F7ZLU8, F6T3L2, H9FU71
    Related
    ENSMMUP00000009708.4, ENSMMUT00000010346.4
    Conserved Domains (3) summary
    smart01053
    Location:387 → 465
    CaMBD; Calmodulin binding domain
    pfam03530
    Location:96 → 203
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:291 → 373
    Ion_trans_2; Ion channel

  2. XM_028838959.1 → XP_028694792.1  small conductance calcium-activated potassium channel protein 1 isoform X6

    UniProtKB/TrEMBL
    A0A5F7ZLU8, H9FU72
    Related
    ENSMMUP00000066602.1, ENSMMUT00000089253.1
    Conserved Domains (3) summary
    smart01053
    Location:384 → 462
    CaMBD; Calmodulin binding domain
    pfam03530
    Location:96 → 203
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:291 → 366
    Ion_trans_2; Ion channel

  3. XM_015123286.2 → XP_014978772.1  small conductance calcium-activated potassium channel protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A5F7ZLU8, F6T3L2, H9FU71
    Conserved Domains (3) summary
    smart01053
    Location:387 → 465
    CaMBD; Calmodulin binding domain
    pfam03530
    Location:96 → 203
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:291 → 373
    Ion_trans_2; Ion channel

  4. XM_015123285.2 → XP_014978771.2  small conductance calcium-activated potassium channel protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5QD29
    Conserved Domains (4) summary
    smart01053
    Location:470 → 548
    CaMBD; Calmodulin binding domain
    pfam15694
    Location:25 → 142
    Med26_M; Mediator complex subunit 26 middle domain
    pfam03530
    Location:179 → 286
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:374 → 452
    Ion_trans_2; Ion channel

  5. XM_028838956.1 → XP_028694789.1  small conductance calcium-activated potassium channel protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A1D5QD29
    Conserved Domains (4) summary
    smart01053
    Location:470 → 545
    CaMBD; Calmodulin binding domain
    pfam15694
    Location:25 → 142
    Med26_M; Mediator complex subunit 26 middle domain
    pfam03530
    Location:179 → 286
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:374 → 452
    Ion_trans_2; Ion channel

  6. XM_015123287.2 → XP_014978773.2  small conductance calcium-activated potassium channel protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A1D5QD29
    Conserved Domains (4) summary
    smart01053
    Location:467 → 545
    CaMBD; Calmodulin binding domain
    pfam15694
    Location:25 → 142
    Med26_M; Mediator complex subunit 26 middle domain
    pfam03530
    Location:179 → 286
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:374 → 449
    Ion_trans_2; Ion channel

  7. XM_028838957.1 → XP_028694790.1  small conductance calcium-activated potassium channel protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A1D5QD29, A0A5F8AQH7
    Related
    ENSMMUP00000080200.1, ENSMMUT00000100902.1
    Conserved Domains (4) summary
    smart01053
    Location:467 → 542
    CaMBD; Calmodulin binding domain
    pfam15694
    Location:25 → 142
    Med26_M; Mediator complex subunit 26 middle domain
    pfam03530
    Location:179 → 286
    SK_channel; Calcium-activated SK potassium channel
    pfam07885
    Location:374 → 449
    Ion_trans_2; Ion channel

RNA

  1. XR_003724898.1 RNA Sequence

  2. XR_003724897.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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