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HOMER3 homer scaffold protein 3 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719647, updated on 17-Aug-2024

Summary

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Official Symbol
HOMER3provided by VGNC
Official Full Name
homer scaffold protein 3provided by VGNC
Primary source
VGNC:VGNC:97774
See related
Ensembl:ENSMMUG00000023294
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See HOMER3 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (18498335..18511039, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (19011433..19024102, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 1 Neighboring gene growth differentiation factor 1 Neighboring gene COPI coat complex subunit epsilon Neighboring gene uncharacterized LOC106994666 Neighboring gene DEAD-box helicase 49 Neighboring gene SURP and G-patch domain containing 2 Neighboring gene armadillo repeat containing 6 Neighboring gene solute carrier family 25 member 42

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled glutamate receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled glutamate receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of store-operated calcium entry IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homer protein homolog 3
Names
homer homolog 3
homer scaffolding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001257689.1 → NP_001244618.1  homer protein homolog 3

    See identical proteins and their annotated locations for NP_001244618.1

    Status: PROVISIONAL

    Source sequence(s)
    JU337184
    UniProtKB/TrEMBL
    F7FF07, G7NNF8
    Related
    ENSMMUP00000059152.2, ENSMMUT00000067395.2
    Conserved Domains (2) summary
    COG1196
    Location:151 → 342
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    cd01206
    Location:6 → 114
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain

RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    18498335..18511039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028838540.1 → XP_028694373.1  homer protein homolog 3 isoform X2

    UniProtKB/TrEMBL
    F7FF19, G7NNF8
    Related
    ENSMMUP00000030662.3, ENSMMUT00000032770.4
    Conserved Domains (2) summary
    cd01206
    Location:6 → 102
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain
    TIGR02168
    Location:116 → 305
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. XM_028838539.1 → XP_028694372.1  homer protein homolog 3 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RFQ8, G7NNF8
    Related
    ENSMMUP00000073012.1, ENSMMUT00000103626.1
    Conserved Domains (2) summary
    cd01206
    Location:6 → 114
    EVH1_Homer_Vesl; Homer/Vesl family proteins EVH1 domain
    TIGR02168
    Location:152 → 341
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type
Nucleotide Protein
Heading Accession and Version

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