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SYDE1 synapse defective Rho GTPase homolog 1 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 719089, updated on 17-Aug-2024

Summary

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Official Symbol
SYDE1provided by VGNC
Official Full Name
synapse defective Rho GTPase homolog 1provided by VGNC
Primary source
VGNC:VGNC:112057
See related
Ensembl:ENSMMUG00000007726
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SYDE1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (14706953..14714827)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (15006769..15014614)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106994652 Neighboring gene caspase 14 Neighboring gene olfactory receptor family 1 subfamily I member 1 Neighboring gene ilvB acetolactate synthase like Neighboring gene notch receptor 3 Neighboring gene epoxide hydrolase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho GTPase-activating protein SYDE1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    14706953..14714827
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028840067.1 → XP_028695900.1  rho GTPase-activating protein SYDE1 isoform X2

    Conserved Domains (1) summary
    cl02570
    Location:329 → 534
    RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...

  2. XM_015123165.2 → XP_014978651.1  rho GTPase-activating protein SYDE1 isoform X1

    UniProtKB/TrEMBL
    A0A1D5RL23
    Related
    ENSMMUP00000061018.2, ENSMMUT00000070361.2
    Conserved Domains (1) summary
    cl02570
    Location:396 → 601
    RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials