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SIN3B SIN3 transcription regulator family member B [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718813, updated on 17-Aug-2024

Summary

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Official Symbol
SIN3Bprovided by VGNC
Official Full Name
SIN3 transcription regulator family member Bprovided by VGNC
Primary source
VGNC:VGNC:77276
See related
Ensembl:ENSMMUG00000018504
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See SIN3B in Genome Data Viewer
Location:
chromosome: 19
Exon count:
20
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (16336162..16386341)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (16776557..16826905)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 38A Neighboring gene CDGSH iron-sulfur domain-containing protein 1 pseudogene Neighboring gene NACHT and WD repeat domain containing 1 Neighboring gene F2R like thrombin or trypsin receptor 3 Neighboring gene C3 and PZP like alpha-2-macroglobulin domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
paired amphipathic helix protein Sin3b
Names
SIN3 homolog B, transcription regulator
SIN3 transcription regulator homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    16336162..16386341
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015123245.2 → XP_014978731.1  paired amphipathic helix protein Sin3b isoform X1

    UniProtKB/TrEMBL
    F6YZ56, G7NMQ0
    Related
    ENSMMUP00000031764.2, ENSMMUT00000038679.3
    Conserved Domains (1) summary
    COG5602
    Location:35 → 1070
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]

  2. XM_015123246.2 → XP_014978732.1  paired amphipathic helix protein Sin3b isoform X2

    UniProtKB/TrEMBL
    F7A9F4, G7NMQ0
    Related
    ENSMMUP00000024347.3, ENSMMUT00000026019.4
    Conserved Domains (1) summary
    COG5602
    Location:35 → 1038
    Sin3; Histone deacetylase complex, regulatory component SIN3 [Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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