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LOC718576 caspase recruitment domain-containing protein 8 [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 718576, updated on 14-Nov-2024

Summary

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Gene symbol
LOC718576
Gene description
caspase recruitment domain-containing protein 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
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Genomic context

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See LOC718576 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
13
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (48174463..48213538, complement)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (43539392..43577018, complement)

Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene DNA ligase 1 Neighboring gene zinc finger SWIM-type containing 9 Neighboring gene caspase recruitment domain-containing protein 8 Neighboring gene vomeronasal 1 receptor macMulV1R-ps1040 pseudogene Neighboring gene zinc finger protein 114 Neighboring gene outer dynein arm docking complex subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activator activity involved in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NLRP3 inflammasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
caspase recruitment domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041772.1 Reference Mmul_10 Primary Assembly

    Range
    48174463..48213538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015124453.2 → XP_014979939.2  caspase recruitment domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:90 → 343
    FIIND; Function to find

  2. XM_015124454.2 → XP_014979940.2  caspase recruitment domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:90 → 343
    FIIND; Function to find

  3. XM_028838583.1 → XP_028694416.1  caspase recruitment domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:90 → 343
    FIIND; Function to find

  4. XM_028838584.1 → XP_028694417.1  caspase recruitment domain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:90 → 343
    FIIND; Function to find

  5. XM_028838586.1 → XP_028694419.1  caspase recruitment domain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:65 → 318
    FIIND; Function to find

  6. XM_028838585.1 → XP_028694418.1  caspase recruitment domain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:72 → 325
    FIIND; Function to find

  7. XM_028838589.1 → XP_028694422.1  caspase recruitment domain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:65 → 318
    FIIND; Function to find

  8. XM_028838587.1 → XP_028694420.1  caspase recruitment domain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:65 → 318
    FIIND; Function to find

  9. XM_028838588.1 → XP_028694421.1  caspase recruitment domain-containing protein 8 isoform X3

    UniProtKB/TrEMBL
    A0A5F7ZNU3
    Conserved Domains (1) summary
    pfam13553
    Location:65 → 318
    FIIND; Function to find

  10. XM_002801323.3 → XP_002801369.3  caspase recruitment domain-containing protein 8 isoform X4

    UniProtKB/TrEMBL
    A0A5F8A9I1
    Conserved Domains (2) summary
    pfam13553
    Location:90 → 343
    FIIND; Function to find
    pfam00619
    Location:360 → 442
    CARD; Caspase recruitment domain
Nucleotide Protein
Heading Accession and Version

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